1

People and ecosystems

Understanding of the links between coral reef ecosystems, the goods and services they provide to people, and the wellbeing of human societies.

2

Ecosystem dynamics: past, present and future

Examining the multi-scale dynamics of reefs, from population dynamics to macroevolution

3

Responding to a changing world

Advancing the fundamental understanding of the key processes underpinning reef resilience.
Coral Bleaching

Coral Bleaching
Coral Reef Studies

ARC Centre of Excellence for Coral Reef Studies
James Cook University Townsville
Queensland 4811 Australia

Phone: 61 7 4781 4000
Email: info@coralcoe.org.au

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The ARC Centre of Excellence for Coral Reef Studies is seeking applications from exceptional students to enroll in a PhD under the supervision of leading researchers at its four nodes around Australia (James Cook University, the Australian National University, the University of Queensland and the University of Western Australia).

The scholarship cycle in Australia is on a calendar basis with closing dates for international and domestic applications between August and October; both with an expected starting date for successful applicants at the beginning of the following year. Suitable applicants will be required to go through a formal application at the relevant University and, if successful, will be awarded a scholarship and tuition waiver. Depending on the University and supervisor, there may be the possibility, in the case of outstanding applicants, for a top-up to their scholarship. To be competitive for a scholarship and fee waiver, applicants must have an Honours degree or Masters degree, preferably with a publication if you are international.

Many student applicants come with scholarships from another funding source such as granting agencies in their home country. We are happy to deal with these applications at any time of the year. Acceptance is dependent on the applicant meeting our academic criteria, has been accepted by a suitable supervisor and meets the language requirements.

The following leading researchers in the Centre have expressed an interest in recruiting new exceptional PhD students. Their email addresses and areas of interest for research projects are listed below. If you are interested, please contact one of the following to discuss opportunities.

Coral Reef Oceanography
Biochemistry, Molecular Biology and Bioinformatics
Conservation Planning
Coral Reef Ecology
Ecological Modelling
Environmental Governance
Human Dimensions and Social-Ecological Systems
Coral Reef Ecology and Biology
Ocean Acidification and Climate Change
Reef Fish Ecology and Climate Change

Ocean Acidification and Climate Change

Professor Malcolm McCulloch
Email: malcolm.mcCulloch@uwa.edu.au

My research program focusses on the response of corals to climate change and ocean acidification. Students with a background in geochemistry and biochemistry are especially encouraged to discuss research opportunities.

  • Quantifying biogenic controls on coral calcification in an acidifying ocean
  • Growth and survival of coral at their extreme limits
  • Long-term coral proxy records of climate change including ocean acidification, ocean warming and river runoff.
  • Role of local versus regional drivers on coral reef ecosystems

ACTIVELY RECRUITING FOR A FULLY FUNDED PhD SCHOLARSHIP: Climate Change in the Deep Oceans. For more information and to apply click here. Preferred commencement before June 2021.

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Coral Reef Oceanography

Professor Ryan Lowe
Email: Ryan.Lowe@uwa.edu.au

My research focuses on how ocean dynamics shape coral reef systems, using a combination of field studies and numerical modelling. Students with quantitative backgrounds in oceanography, the geosciences, or related fields are especially encouraged to discuss research opportunities.

  • Hydrodynamics of coral reef systems
  • Process-based modelling studies of reef dynamics
  • Biophysical interactions within coral reefs
  • Coral reef carbonate budgets and response to environmental change
  • Mechanisms of coral reef connectivity
  • Tropical cyclone impacts on reefs
  • Downscaling ocean climate change to local reefs

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Biochemistry, Molecular Biology and Bioinformatics

Professor David Miller
Email: david.miller@jcu.edu.au

  • Molecular mechanisms of immunity and disease in corals
  • Coral – microbe interactions, particularly mechanisms by which corals manipulate associated bacteria
  • Developmental biology and metamorphosis in soft and hard corals
  • The molecular mechanisms of calcification in corals, octocorals and calcareous sponges
  • Comparative genomics of corals and other “lower” animals
  • Stress responses and epigenetics of hard and soft corals

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Conservation Planning

Professor Bob Pressey
Email: bob.pressey@jcu.edu.au

  • Design of marine protected areas and use-zones within them
  • Implementation requirements for turning conservation plans into conservation action: social, economic and political considerations
  • Testing the effectiveness of marine habitats as surrogates for species distributions
  • Planning to promote the persistence of ecological processes, including dispersal of larvae between reefs and patch dynamics of disturbance and resources
  • Integrated conservation planning for coastal catchments and near-shore marine areas
  • Improved ways of incorporating social and economic considerations into planning decisions
  • Explaining and predicting reserve management costs from internal and external drivers
  • Measuring the impact (difference made) by conservation reserves

Dr Alana Grech
Email: alana.grech@jcu.edu.au

  • Spatial planning and coastal management
  • Cumulative impact and risk assessments
  • Biophysical modelling of marine plant dispersal and connectivity

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Coral Reef Ecology

Professor David Bellwood
Email: david.bellwood@jcu.edu.au

  • Evolution and ecology of reef fishes.
  • The global biogeography of coral reef species
  • Developing new technologies for coral reef regeneration and recovery
  • Understanding the importance of biodiversity on coral reefs
  • Identifying critical ecosystem processes on coral reefs
  • Evaluating the role of herbivorous fishes in reef systems
  • Understanding direct human impacts and climate change on ecosystem processes
  • Using fossils and phylogenies to unravel the evolution of reef fishes

Dr Andrew Hoey
Email: andrew.hoey1@jcu.edu.au

  • Resilience and recovery of reef systems
  • The role of macroalgae and ecological feedbacks in reef dynamics
  • Anthropogenic and climate change effects on ecosystem function
  • Biology, ecology and role of herbivorous fishes on coral reefs
  • Effects of temperature on reef processes

Professor Peter Mumby
Email: p.j.mumby@uq.edu.au

  • Coral reef resilience
  • Marine reserve design
  • Management of reef fisheries and their productivity
  • Climate change impacts on ecosystem function
  • Mapping ecosystem services
  • Modelling coral reef futures with different management scenarios

Professor John Pandolfi
Email: j.pandolfi@uq.edu.au

  • Effects of climate change on tropical and sub-tropical coral reefs
  • Ecological dynamics of coral reef ecosystems over broad spatial and temporal scales
  • Uncovering shifting baselines to guide reef management actions
  • Historical ecology of fishing in Australia
  • The origins and evolutionary turnover of Indo-Pacific reef biodiversity

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Ecological Modelling

Professor Peter Mumby

Email: p.j.mumby@uq.edu.au

  • Future dynamics of coral reefs under climate change and role of management interventions
  • Ecosystem function and ecosystem services
  • Coral reef resilience. Enquiries to Professor Mumby regarding a PhD scholarship are welcome

Professor Graeme Cumming
Email: graeme.cumming@jcu.edu.au

  • Ecosystem structure-process relationships, spatial resilience, and collapse

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Environmental Governance

Associate Professor Tiffany Morrison
Email: tiffany.morrison@jcu.edu.au

  • Quantitative and qualitative analysis of the political dynamics of large scale governance systems
  • Longitudinal transformation of large-scale governance systems in tropical, coastal and marine regions
  • The role of large organisations (public, private, non-profit) in transformative governance
  • Adaptation of governance to large-scale crisis

Dr. Michele Barnes
Email: Michele.barnes@jcu.edu.au

  • Social networks, social capital, and environmental outcomes
  • Social-ecological networks
  • Adaptation, transformation, and multi-level resilience
  • Inequality, power, and sociocultural diversity in coastal communities

Professor Graeme Cumming
Email: mailto:graeme.cumming@jcu.edu.au

  • Landscape ecology of institutions

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Human Dimensions and Social-Ecological Systems

Dr. Michele Barnes
Email: Michele.barnes@jcu.edu.au

  • Social networks, social capital, and environmental outcomes
  • Social-ecological networks
  • Adaptation, transformation, and multi-level resilience
  • Inequality, power, and sociocultural diversity in coastal communities

Professor Graeme Cumming
Email: graeme.cumming@jcu.edu.au

  • Modelling coral reef-associated social-ecological systems and their resilience
  • Quantitative analysis of social-ecological collapse

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Coral Biology and Ecology

Professor Andrew Baird
Email: andrew.baird@jcu.edu.au

  • Coral life histories
  • Coral systematics

Dr Mia Hoogenboom
Email: mia.hoogenboom1@jcu.edu.au

  • Impacts of climate change on corals and reefs
  • Ecological modelling: from individuals to ecosystems
  • Effects of pollution on reef organisms
  • Trait-based approaches to understanding coral communities
  • Ecosystem function of corals

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Ocean Acidification and Climate Change

Professor Malcolm McCulloch
Email: malcolm.mcCulloch@uwa.edu.au

My research program focusses on the response of corals to climate change and ocean acidification. Students with a background in geochemistry and biochemistry are especially encouraged to discuss research opportunities.

  • Quantifying biogenic controls on coral calcification in an acidifying ocean
  • Growth and survival of coral at their extreme limits
  • Long-term coral proxy records of climate change including ocean acidification, ocean warming and river runoff.
  • Role of local versus regional drivers on coral reef ecosystems

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Reef Fish Ecology and Climate Change

Professor Geoff Jones
Email: geoffrey.jones@jcu.edu.au

  • Connectivity of reef fish populations
  • Influence of habitat loss on threatened reef fishes
  • Behavioural ecology of coral reef fishes
  • Role of marine reserves in biodiversity conservation and fisheries
  • Coral reef conservation in the coral triangle

Professor Mark McCormick
Email: mark.mccormick@jcu.edu.au

  • Climate Change and the Demography of Reef Fish Assemblages

Professor Garry Russ
Email: garry.russ@jcu.edu.au

  • Fisheries on coral reefs

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Media Releases

More
26 Jul 2021
Measuring conservation in a way that counts

A new study raises questions on whether current conservation science and policy for protected areas could be saving more biodiversity—with political and economic expediency often having taken prece
13 Jul 2021
Banishing bandits: other countries bear the cost

A new study reveals the strategies that stop bandits from illegally fishing in Australian waters—but warns there is a cost to the region’s poorer countries. Co-author Dr Brock Bergseth, from th
02 Jul 2021
Leading scientists praise UNESCO’s leadership after draft decision on the Great Barrier Reef

Five world-renowned scientists have signed a letter to UNESCO Director-General Audrey Azoulay to "thank UNESCO for its leadership in recognising the threat of climate change to the Great Barrier Reef

22 Jun 2021
Baby reef fishes swim for gold

A new study has found baby coral reef fishes can outpace all other baby fishes in the ocean. Lead author Adam Downie is a PhD candidate at the ARC Centre of Excellence for Coral Reef Studies at Jam

Seminars

More
27 Jul
Using whole genome sequencing to identify signatures of recent selection, divergence and demographic change in populations of Acropora digitifera from North Western Australia

Abstract: Coral assemblages from the remote Kimberley coast in North Western Australia thrive despite experiencing extreme heat, aerial exposure and fluctuating turbidity.  These corals present an

12 Jul
Bio-physical interactions can shape populations.

Abstract: Bio-physical interactions can shape the structures and dynamics of populations. Open populations are well mixed over hundreds to thousands of kilometres. In contrast, closed populations exc
07 Jul
Old and cold: Biology of the Greenland shark

Abstract: The elusive Greenland shark (Somniosus microcephalus) is an understudied and putatively important species in the Arctic. They inhabits large parts of the North Atlantic and Arctic Ocean inc
02 Jul
History, Country, Identity

Abstract: The presentation will explore the National NAIDOC Theme and contextualise the connection between Indigenous Self-Determination and Country. The presentation will provide an overview of hist
24 Jun
Does gene body methylation play a role in adaptation?

Abstract: Among all epigenetic modifications, gene body methylation (GBM) is the most studied but arguably the least understood in terms of its function. It is believed by many to facilitate rapid ada
29 May
Hidden differences among cryptic species of coral (Pocillopora spp) have large ecological consequences at Moorea, French Polynesia.

Abstract: I will present some findings showing genetically-identified cryptic coral species within a functional group differing in their response to disturbance (bleaching), environmental gradients (
27 May
Phylogenomics of Antipatharia (black corals) and their role as reef ecosystem engineers

Abstract: This project aims to set some of the fundamentals necessary for the study of antipatharians (black corals) in the disciplines of ecology, phylogenomics, biology and conservation management.
25 May
Multi-site, harmonized sustainability science: community monitoring in common-pool resources

Abstract: In 1990, Elinor Ostrom published Governing the Commons, a demonstration that communities could successfully manage common pool resources without resorting to individual private property ri
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Coral Reef Studies

ARC Centre of Excellence for Coral Reef Studies
James Cook University Townsville
Queensland 4811 Australia

Phone: 61 7 4781 4000
Email: info@coralcoe.org.au

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