Scientific Publications 2007

Journal Articles [150]

[1]  Abram, NJ, Gagan, MK, Liu, Z, Hantoro, WS, McCulloch, MT and Suwargadi, BW (2007). Seasonal characteristics of the Indian Ocean Dipole during the Holocene epoch. Nature 445(7125): 299-302.
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[2]  Adjeroud, M, Pratchett, M, Kospartov, M, Lejeusne, C and Penin, L (2007). Small-scale variability in the size structure of scleractinian corals around Moorea, French Polynesia: patterns across depths and locations. Hydrobiologia 589(1): 117-126.
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[3]  Ainsworth, T, Kvennefors, E, Blackall, L, Fine, M and Hoegh-Guldberg, O (2007). Disease and cell death in white syndrome of Acroporid corals on the Great Barrier Reef. Marine Biology 151(1): 19-29.
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[4]  Ainsworth, TD, Kramasky-Winter, E, Loya, Y, Hoegh-Guldberg, O and Fine, M (2007). Coral Disease Diagnostics: What’s between a Plague and a Band? Applied Environmental Microbiology 73(3): 981-992.
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[5]  Almany, G, Peacock, L, Syms, C, McCormick, M and Jones, G (2007). Predators target rare prey in coral reef fish assemblages. Oecologia 152(4): 751-761.
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[6]  Almany, GR, Berumen, ML, Thorrold, SR, Planes, S and Jones, GP (2007). Local Replenishment of Coral Reef Fish Populations in a Marine Reserve. Science 316(5825): 742-744.
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[7]  Anctil, M, Hayward, DC, Miller, DJ and Ball, EE (2007). Sequence and expression of four coral G protein-coupled receptors distinct from all classifiable members of the rhodopsin family. Gene 392(1-2): 14-21.
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[9]  Anthony, K and Kerswell, A (2007). Coral mortality following extreme low tides and high solar radiation. Marine Biology 151(5): 1623-1631.
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[10]  Anthony, KRN, Connolly, SR and Hoegh-Guldberg, O (2007). Bleaching, energetics, and coral mortality risk: Effects of temperature, light, and sediment regime. Limnology and Oceanography 52(2): 716-726.
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[11]  Arvedlund, M, Munday, PL and Takemura, A (2007). The morphology and ultrastructure of the peripheral olfactory organ in newly metamorphosed coral-dwelling gobies, Paragobiodon xanthosomus Bleeker (Gobiidae, Teleostei). Tissue and Cell 39(5): 335-342.
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[13]  Baird, AH, Cumbo, VR, Leggat, W and Rodriguez-Lanetty, M (2007). Fidelity and flexibility in coral symbioses. Marine Ecology Progress Series 347: 307-309.
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[14]  Baird, AH and Kerr, AM (2007). The Dangerous Myth of Tsunami Greenbelts. Science 314(5798): E-Letter.
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[15]  Ball, EE, de Jong, DM, Schierwater, B, Shinzato, C, Hayward, DC and Miller, DJ (2007). Implications of cnidarian gene expression patterns for the origins of bilaterality is the glass half full or half empty? Integrative and Comparative Biology 47(5): 701-711.
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[16]  Battad, JM, Wilmann, PG, Olsen, S, Byres, E, Smith, SC, Dove, SG, Turcic, KN, Devenish, RJ, Rossjohn, J and Prescott, M (2007). A Structural Basis for the pH-dependent Increase in Fluorescence Efficiency of Chromoproteins. Journal of Molecular Biology 368(4): 998-1010.
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[17]  Bay, LK, Crozier, YC and Crozier, RH (2007). Isolation and characterization of eight microsatellite loci in the mangrove mud-nesting ant, Polyrhachis sokolova. Molecular Ecology Notes 7(6): 1239-1241.
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[18]  Boyett, H, Bourne, D and Willis, B (2007). Elevated temperature and light enhance progression and spread of black band disease on staghorn corals of the Great Barrier Reef. Marine Biology 151(5): 1711-1720.
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[19]  Bradshaw, CJA, Mollet, HF and Meekan, MG (2007). Inferring population trends for the world’s largest fish from mark-recapture estimates of survival. Journal of Animal Ecology 76(3): 480-489.
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[20]  Broderick, K (2007). Getting a Handle on Social-ecological Systems in Catchments: the nature and importance of environmental perception. Australian Geographer 38(3): 297 – 308.
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[21]  Bruno, JF, Selig, ER, Casey, KS, Page, CA, Willis, BL, Harvell, CD, Sweatman, H and Melendy, AM (2007). Thermal Stress and Coral Cover as Drivers of Coral Disease Outbreaks. PLoS Biology 5(6): e124.
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[22]  Burgess, SC, Kingsford, MJ and Black, KP (2007). Influence of tidal eddies and wind on the distribution of presettlement fishes around One Tree Island, Great Barrier Reef. Marine Ecology Progress Series 341: 233-242.
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[23]  Caldeira, K, Archer, D, Barry, JP, Bellerby, RGJ, Brewer, PG, Cao, L, Dickson, AG, Doney, SC, Elderfield, H, Fabry, VJ, Feely, RA, Gattuso, J-P, Haugan, PM, Hoegh-Guldberg, O, Jain, AK, Kleypas, JA, Langdon, C, Orr, JC, Ridgwell, A, Sabine, CL, Seibel, BA, Shirayama, Y, Turley, C, Watson, AJ and Zeebe, RE (2007). Comment on ‘‘Modern-age buildup of CO2 and its effects on seawater acidity and salinity’’ by Hugo A. Loa´iciga. Geophysical Research Letters 34(L18608): 3.
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[24]  Calvo, E, Marshall, JF, Pelejero, C, McCulloch, MT, Gagan, MK and Lough, JM (2007). Interdecadal climate variability in the Coral Sea since 1708 A.D. Palaeogeography, Palaeoclimatology, Palaeoecology 248(1-2): 190-201.
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[25]  Campbell, SJ, Pratchett, MS, Anggoro, AW, Ardiwijaya, RL, Fadli, N, Herdiana, Y, Kartawijaya, T, Mahyiddin, D, Mukminin, A, Pardede, ST, Rudi, E, Siregar, AM and Baird, AH (2007). Disturbance to Coral Reefs in Aceh, Northern Sumatra: Impacts of the Sumatra-Andaman Tsunami and Pre-Tsunami Degradation. Atoll Research Bulletin 544: 55-78.
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[26]  Cantin, NE, Negri, AP and Willis, BL (2007). Photoinhibition from chronic herbicide exposure reduces reproductive output of reef-building corals. Marine Ecology Progress Series 344: 81-93.
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[27]  Carricart-Ganivet, JP, Lough, JM and Barnes, DJ (2007). Growth and luminescence characteristics in skeletons of massive Porites from a depth gradient in the central Great Barrier Reef. Journal of Experimental Marine Biology and Ecology 351(1-2): 27-36.
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[29]  Carwardine, J, Rochester, WA, Richardson, KS, Williams, KJ, Pressey, RL and Possingham, HP (2007). Conservation planning with irreplaceability: does the method matter? Biodiversity and Conservation 16(1): 245-258.
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[30]  Castro, ALF, Stewart, BS, Wilson, SG, Hueter, RE, Meekan, MG, Motta, PJ, Bowen, BW and Karl, SA (2007). Population genetic structure of Earth’s largest fish, the whale shark (Rhincodon typus). Molecular Ecology 16(24): 5183-5192.
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[32]  Chidlow, JA, Simpfendorfer, CA and Russ, GR (2007). Variable growth band deposition leads to age and growth uncertainty in the western wobbegong shark, Orectolobus hutchinsi. Marine and Freshwater Research 58(9): 856-865.
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[33]  Cinner, J (2007). Designing marine reserves to reflect local socioeconomic conditions: lessons from long-enduring customary management systems. Coral Reefs 26(4): 1035-1045.
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[34]  Cinner, JE (2007). The role of taboos in conserving coastal resources in Madagascar. SPC Traditional Marine Resource Management and Knowledge Information Bulletin 22: 15-23.
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[35]  Cinner, JE and Aswani, S (2007). Integrating customary management into marine conservation. Biological Conservation 140(3-4): 201-216.
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[36]  Cinner, JE, Sutton, SG and Bond, TG (2007). Socioeconomic Thresholds That Affect Use of Customary Fisheries Management Tools. Conservation Biology 21(6): 1603-1611.
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[37]  Cornell, HV, Karlson, RH and Hughes, TP (2007). Scale-Dependant Variation in Coral Community Similarity Across Sites, Islands, and Island Groups. Ecology 88(7): 1707-1715.
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[38]  D’iorio, M, Jupiter, SD, Cochran, SA and Potts, DC (2007). Optimizing Remote Sensing and GIS Tools for Mapping and Managing the Distribution of an Invasive Mangrove (Rhizophora mangle) on South Molokai, Hawaii. Marine Geodesy 30(1): 125 – 144.
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[39]  Dambacher, JM, Brewer, DT, Dennis, DM, Macintyre, M and Foale, S (2007). Qualitative Modelling of Gold Mine Impacts on Lihir Island’s Socioeconomic System and Reef-Edge Fish Community. Environmental Science and Technology 41(2): 555-562.
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[40]  Depczynski, M, Fulton, C, Marnane, M and Bellwood, D (2007). Life history patterns shape energy allocation among fishes on coral reefs. Oecologia 153(1): 111-120.
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[41]  Deutsch, L, Graslund, S, Folke, C, Troell, M, Huitric, M, Kautsky, N and Lebel, L (2007). Feeding aquaculture growth through globalization: Exploitation of marine ecosystems for fishmeal. Global Environmental Change-Human and Policy Dimensions 17(2): 238-249.
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[42]  Diaz-Pulido, G, Villamil, L and Almanza, V (2007). Herbivory effects on the morphology of the brown alga Padina boergesenii (Phaeophyta). Phycologia 46(2): 131-136.
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[43]  Edinger, EN, Burr, GS, Pandolfi, JM and Ortiz, JC (2007). Age accuracy and resolution of Quaternary corals used as proxies for sea level. Earth and Planetary Science Letters 253(1-2): 37-49.
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[45]  Fauvelot, C, Lemaire, C, Planes, S and Bonhomme, F (2007). Inferring gene flow in coral reef fishes from different molecular markers: which loci to trust? Heredity 99(3): 331-339.
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[46]  Feary, D, Almany, G, McCormick, M and Jones, G (2007). Habitat choice, recruitment and the response of coral reef fishes to coral degradation. Oecologia 155: 727-737.
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[47]  Feary, DA, Almany, GR, Jones, GP and McCormick, MI (2007). Coral degradation and the structure of tropical reef fish communities. Marine Ecology Progress Series 333: 243-248.
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[48]  Fleitmann, D, Dunbar, RB, McCulloch, M, Mudelsee, M, Vuille, M, McClanahan, TR, Cole, JE and Eggins, S (2007). East African soil erosion recorded in a 300 year old coral colony from Kenya. Geophysical Research Letters 34(L04401).
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[49]  Folke, C (2007). Social-ecological systems and adaptive governance of the commons. Ecological Research 22(1): 14-15.
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[51]  Forêt, S, Kassahn, KS, Grasso, L, Hayward, D, Iguchi, A, Ball, E and Miller, D (2007). Genomic and microarray approaches to coral reef conservation biology. Coral Reefs 26(3): 475-486.
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[52]  Fox, RJ and Bellwood, DR (2007). Quantifying herbivory across a coral reef depth gradient. Marine Ecology Progress Series 339: 49-59.
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[53]  Frisch, A, McCormick, M and Pankhurst, N (2007). Reproductive periodicity and steroid hormone profiles in the sex-changing coral-reef fish, Plectropomus leopardus. Coral Reefs 26(1): 189-197.
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[54]  Frisch, AJ, Walker, SPW, McCormick, MI and Solomon-Lane, TK (2007). Regulation of protogynous sex change by competition between corticosteroids and androgens: An experimental test using sandperch, Parapercis cylindrica. Hormones and Behavior 52(4): 540-545.
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[55]  Fukatsu, T, Onodera, K, Ohta, Y, Oba, Y, Nakamura, H, Shintani, T, Yoshioka, Y, Okamoto, T, tenLohuis, M, Miller, DJ, Kawachi, M and Ojika, M (2007). Zooxanthellamide D, a Polyhydroxy Polyene Amide from a Marine Dinoflagellate, and Chemotaxonomic Perspective of the Symbiodinium Polyols. Journal of Natural Products 70(3): 407-411.
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[56]  Gagliano, M, McCormick, M and Meekan, M (2007). Temperature-induced shifts in selective pressure at a critical developmental transition. Oecologia 152(2): 219-225.
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[57]  Gagliano, M and McCormick, MI (2007). Compensating in the wild: is flexible growth the key to early juvenile survival? Oikos 116(1): 111-120.
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[58]  Gagliano, M and McCormick, MI (2007). Maternal condition influences phenotypic selection on offspring. Journal of Animal Ecology 76(1): 174-182.
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[59]  Gagliano, M, McCormick, MI and Meekan, MG (2007). Survival against the odds: ontogenetic changes in selective pressure mediate growth-mortality trade-offs in a marine fish. Proceedings of the Royal Society B: Biological Sciences 274(1618): 1575-1582.
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[60]  Gerlach, G, Atema, J, Kingsford, MJ, Black, KP and Miller-Sims, V (2007). Smelling home can prevent dispersal of reef fish larvae. Proceedings of the National Academy of Sciences 104(3): 858-863.
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[61]  Ghavam Mostafavi, P, Fatemi, S, Shahhosseiny, M, Hoegh-Guldberg, O and Loh, W (2007). Predominance of clade D Symbiodinium in shallow-water reef-building corals off Kish and Larak Islands (Persian Gulf, Iran). Marine Biology 153(1): 25-34.
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[62]  Gilbert, A, Andrefouet, S, Planes, S, Planes, S, Friedman, K and Remoissenet, G (2007). First observation of the giant clam Tridacna squamosa in French Polynesia: a species range extension. Coral Reefs 26(2): 229-229.
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[63]  Gunderson, L and Folke, C (2007). Looking forward, looking back. Ecology and Society 12(1).
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[64]  Halfar, J, Steneck, R, Schone, B, Moore, GWK, Joachimski, M, Kronz, A, Fietzke, J and Estes, J (2007). Coralline alga reveals first marine record of subarctic North Pacific climate change. Geophysical Research Letters 34(7).
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[65]  Harvell, D, Jordán-Dahlgren, E, Merkel, S, Rosenberg, E, Raymundo, L, Smith, G, Weil, E and Willis, B (2007). Coral disease, environmental drivers and the balance between coral and microbial associates. Oceanography 20(1): 58-81.
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[66]  Hemmrich, G, Miller, DJ and Bosch, TCG (2007). The evolution of immunity: a low-life perspective. Trends in Immunology 28(10): 449-454.
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[67]  Hendy, EJ, Gagan, MK, Lough, JM, McCulloch, M and deMenocal, PB (2007). Impact of skeletal dissolution and secondary aragonite on trace element and isotopic climate proxies in Porites corals. Paleoceanography 22(PA4101): 1-10.
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[68]  Hernaman, V and Munday, P (2007). Evolution of mating systems in coral reef gobies and constraints on mating system plasticity. Coral Reefs 26(3): 585-595.
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[69]  Hoegh-Guldberg, O (2007). Engaging Science with Policy. Australasian Science Magazine 28(6): 41.
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[70]  Hoegh-Guldberg, O, Muller-Parker, G, Cook, C, Gates, R, Gladfelter, E, Trench, R and Weis, V (2007). Len Muscatine (1932–2007) and his contributions to the understanding of algal-invertebrate endosymbiosis. Coral Reefs.
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[71]  Hoegh-Guldberg, O, Mumby, PJ, Hooten, AJ, Steneck, RS, Greenfield, P, Gomez, E, Harvell, CD, Sale, PF, Edwards, AJ, Caldeira, K, Knowlton, N, Eakin, CM, Iglesias-Prieto, R, Muthiga, N, Bradbury, RH, Dubi, A and Hatziolos, ME (2007). Coral Reefs Under Rapid Climate Change and Ocean Acidification. Science 318(5857): 1737-1742.
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[72]  Hoey, J, McCormick, M and Hoey, A (2007). Influence of depth on sex-specific energy allocation patterns in a tropical reef fish. Coral Reefs 26(3): 603-613.
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[73]  Hughes, TP, Bellwood, DR, Folke, CS, McCook, LJ and Pandolfi, JM (2007). No-take areas, herbivory and coral reef resilience. Trends in Ecology & Evolution 22(1): 1-3.
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[74]  Hughes, TP, Gunderson, LH, Folke, C, Baird, AH, Bellwood, D, Berkes, F, Crona, B, Helfgott, A, Leslie, H, Norberg, J, Nystrom, M, Olsson, P, Osterblom, H, Scheffer, M, Schuttenberg, H, Steneck, RS, Tengo, M, Troell, M, Walker, B, Wilson, J and Worm, B (2007). Adaptive Management of the Great Barrier Reef and the Grand Canyon World Heritage Areas. Ambio 36(7): 586-592.
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[75]  Hughes, TP, Rodrigues, MJ, Bellwood, DR, Ceccarelli, D, Hoegh-Guldberg, O, McCook, L, Moltschaniwskyj, N, Pratchett, MS, Steneck, RS and Willis, B (2007). Phase Shifts, Herbivory, and the Resilience of Coral Reefs to Climate Change. Current Biology 17(4): 360-365.
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[76]  Idjadi, JA and Karlson, RH (2007). Spatial arrangement of competitors influences coexistence of reef-building corals. Ecology 88(10): 2449-2454.
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[77]  Iguchi, A, Márquez, L, Knack, B, Shinzato, C, van Oppen, MJH, Willis, B, Hardie, K, Catmull, J and Miller, D (2007). Apparent Involvement of a β1 Type Integrin in Coral Fertilization. Marine Biotechnology 9(6): 760-765.
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[78]  Jacobi, S, ReVelle, C, Pressey, R and Williams, J (2007). Novel operations research methods for efficiently determining irreplaceable sites for conservation. Environmental Modeling and Assessment 12(2): 91-103.
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[79]  Job, S and Bellwood, D (2007). Ultraviolet photosensitivity and feeding in larval and juvenile coral reef fishes. Marine Biology 151(2): 495-503.
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[80]  Johansen, J, Fulton, C and Bellwood, D (2007). Avoiding the flow: refuges expand the swimming potential of coral reef fishes. Coral Reefs 26(3): 577-583.
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[81]  Johansen, JL, Fulton, CJ and Bellwood, DR (2007). Estimating the sustained swimming ability of coral reef fishes. Marine and Freshwater Research 58(3): 233-239.
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[82]  Jones, GP, Srinivasan, M and Almany, GR (2007). Population Connectivity and Conservation of Marine Biodiversity. Oceanography 20(3): 42-53.
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[83]  Jupiter, SD, Potts, DC, Phinn, SR and Duke, NC (2007). Natural and anthropogenic changes to mangrove distributions in the Pioneer River Estuary (QLD, Australia). Wetlands Ecology and Management 15(1): 51-62.
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[84]  Karlson, RH, Cornell, HV and Hughes, TP (2007). Aggregation influences coral species richness at multiple spatial scales. Ecology 88(1): 170-177.
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[85]  Kerr, AM and Baird, AH (2007). Natural barriers to natural disasters.(coastal forests)(Author abstract)(Column). Bioscience 57(2): 102.
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[88]  Lecchini, D, Planes, S and Galzin, R (2007). The influence of habitat characteristics and conspecifics on attraction and survival of coral reef fish juveniles. Journal of Experimental Marine Biology and Ecology 341(1): 85-90.
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[89]  Leggat, W, Ainsworth, T, Bythell, J, Dove, S, Gates, R, Hoegh-Guldberg, O, Iglesias-Prieto, R and Yellowlees, D (2007). The hologenome theory disregards the coral holobiont. Nature Reviews Microbiology 5(10): C1.
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[90]  Leggat, W, Hoegh-Guldberg, O, Dove, S and Yellowlees, D (2007). Analysis of an EST Library from the Dinoflagellate (Symbiodinium sp.) symbiont of reef-building corals1. Journal of Phycology 43(5): 1010-1021.
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[91]  Lesser, MP, Bythell, JC, Gates, RD, Johnstone, RW and Hoegh-Guldberg, O (2007). Are infectious diseases really killing corals? Alternative interpretations of the experimental and ecological data. Journal of Experimental Marine Biology and Ecology 346(1-2): 36-44.
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[92]  Lesser, MP, Falcón, LI, RodrÃguez-Román, A, EnrÃquez, S, Hoegh-Guldberg, O and Iglesias-Prieto, R (2007). Nitrogen fixation by symbiotic cyanobacteria provides a source of nitrogen for the scleractinian coral Montastraea cavernosa. Marine Ecology Progress Series 346: 143-152.
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[93]  Levy, O, Appelbaum, L, Leggat, W, Gothlif, Y, Hayward, DC, Miller, DJ and Hoegh-Guldberg, O (2007). Light-Responsive Cryptochromes from a Simple Multicellular Animal, the Coral Acropora millepora. Science 318(5849): 467-470.
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[94]  Lewis, SE, Shields, GA, Kamber, BS and Lough, JM (2007). A multi-trace element coral record of land-use changes in the Burdekin River catchment, NE Australia. Palaeogeography, Palaeoclimatology, Palaeoecology 246(2-4): 471-487.
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[95]  Limbourn, AJ, Jones, GP, Munday, PL and Srinivasan, M (2007). Niche shifts and local competition between two coral reef fishes at their geographic boundary. Marine and Freshwater Research 58(12): 1120-1129.
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[98]  Lough, J (2007). Northeastern Australian tropical river flow and rainfall reconstructions from coral luminescence. Quaternary International 167-168(Supplement 1): 250.
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[99]  Lough, JM (2007). Tropical river flow and rainfall reconstructions from coral luminescence: Great Barrier Reef, Australia. Paleoceanography 22(June): 2218-2234.
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[100]  Macintyre, M and Foale, S (2007). Land and Marine Tenure, Ownership and New forms of Entitlement on Lihir: Changing Notions of Property in the Context of a Goldmining Project. Human Organization 66(1): 49-59.
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[101]  Mantyka, C and Bellwood, D (2007). Direct evaluation of macroalgal removal by herbivorous coral reef fishes. Coral Reefs 26(2): 435-442.
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[102]  Markey, KL, Baird, AH, Humphrey, C and Negri, AP (2007). Insecticides and a fungicide affect multiple coral life stages. Marine Ecology Progress Series 330: 127-137.
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[103]  McCormick, M and Larson, J (2007). Field verification of the use of chemical alarm cues in a coral reef fish. Coral Reefs 26(3): 571-576.
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[104]  McCormick, M and Manassa, R (2007). Predation risk assessment by olfactory and visual cues in a coral reef fish. Coral Reefs.
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[105]  McCormick, MI and Meekan, MG (2007). Social facilitation of selective mortality. Ecology 88(6): 1562-1570.
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[107]  Mieog, J, van Oppen, M, Cantin, N, Stam, W and Olsen, J (2007). Real-time PCR reveals a high incidence of Symbiodinium clade D at low levels in four scleractinian corals across the Great Barrier Reef: implications for symbiont shuffling. Coral Reefs 26(3): 449-457.
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[109]  Miller, D, Hemmrich, G, Ball, E, Hayward, D, Khalturin, K, Funayama, N, Agata, K and Bosch, T (2007). The innate immune repertoire in Cnidaria – ancestral complexity and stochastic gene loss. Genome Biology 8(4): R59.
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[110]  Montagna, P, McCulloch, M, Mazzoli, C, Silenzi, S and Odorico, R (2007). The non-tropical coral Cladocora caespitosa as the new climate archive for the Mediterranean: high-resolution (~weekly) trace element systematics. Quaternary Science Reviews 26(3-4): 441-462.
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[111]  Moore, P, Hawkins, SJ and Thompson, RC (2007). Role of biological habitat amelioration in altering the relative responses of congeneric species to climate change. Marine Ecology Progress Series 334: 11-19.
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[112]  Moore, P, Thompson, RC and Hawkins, SJ (2007). Effects of grazer identity on the probability of escapes by a canopy-forming macroalga. Journal of Experimental Marine Biology and Ecology 344(2): 170-180.
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[113]  Morimoto, M, Kayanne, H, Abe, O and McCulloch, MT (2007). Intensified mid-Holocene Asian monsoon recorded in corals from Kikai Island, subtropical northwestern Pacific. Quaternary Research 67(2): 204-214.
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[114]  Munkres, KP, Bay, LK, Jerry, DR, McCormick, MI and Herwerden, LV (2007). Development and characterization of microsatellite markers for parentage analyses of the coral reef damselfish (Pomacentrus amboinensis: Pomacentridae). Conservation Genetics.
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[115]  Nilsson, G, Hobbs, JP, Östlund-Nilsson, S and Munday, P (2007). Hypoxia tolerance and air-breathing ability correlate with habitat preference in coral-dwelling fishes. Coral Reefs 26(2): 241-248.
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[118]  Pandolfi, JM (2007). A New, Extinct Pleistocene Reef Coral from the Montastraea Annularis Species Complex. Journal of Paleontology 81(3): 472-482.
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[119]  Pandolfi, JM and Jackson, JBC (2007). The Role of Algae. American Scientist 95(1).
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[120]  Penin, L, Adjeroud, M, Pratchett, MS and Hughes, TP (2007). Spatial distribution of juvenile and adult corals around Moorea (French Polynesia): implications for population regulation. Bulletin of Marine Science 80(2): 379-389.
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[122]  Poloczanska, ES, Babcock, R, Butler, A, Hobday, AJ, Hoegh-Guldberg, O, Matear, R, Okey, TA, Kunz, TJ and Richardson, AJ (2007). Impacts of Climate Change on Australian Marine Life. Oceanography and Marine Biology: an Annual Review 45: 407-478.

[123]  Pratchett, MS (2007). Dietary selection by coral-feeding butterflyfishes (Chaetodontidae) on the Great Barrier Reef, Australia. Raffles Bulletin of Zoology S14: 155-160.
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[124]  Pratchett, MS (2007). Feeding preferences of Acanthaster planci (Echinodermata: Asteroidea) under controlled conditions of food availability. Pacific Science 61(1): 113-120.
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[125]  Pressey, RL, Cabeza, M, Watts, ME, Cowling, RM and Wilson, KA (2007). Conservation planning in a changing world. Trends in Ecology & Evolution 22(11): 583-592.
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[127]  Rowat, D, Meekan, MG, Engelhardt, U, Pardigon, B and Vely, M (2007). Aggregations of juvenile whale sharks (Rhincodon typus) in the Gulf of Tadjoura, Djibouti. Environmental Biology of Fishes 80(4): 465-472.
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[128]  Sampayo, EM, Franceschinis, L, Hoegh-Guldberg, OVE and Dove, S (2007). Niche partitioning of closely related symbiotic dinoflagellates. Molecular Ecology 16(17): 3721-3733.
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[129]  Sampey, A, McKinnon, AD, Meekan, MG and McCormick, MI (2007). Glimpse into guts: overview of the feeding of larvae of tropical shorefishes. Marine Ecology Progress Series 339: 243-257.
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[131]  Schultz, L, Folke, C and Olsson, P (2007). Enhancing ecosystem management through social-ecological inventories: lessons from Kristianstads Vattenrike, Sweden. Environmental Conservation 34(2): 140-152.
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[132]  Schuttenberg, H and Hoegh-Guldberg, O (2007). A World with Corals: What Will It Take? Science 318(5847): 42b-.
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[133]  Sleeman, JC, Meekan, MG, Wilson, SG, Jenner, CKS, Jenner, MN, Boggs, GS, Steinberg, CC and Bradshaw, CJA (2007). Biophysical correlates of relative abundances of marine megafauna at Ningaloo Reef, Western Australia. Marine and Freshwater Research 58(7): 608-623.
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[135]  Thompson, V, Munday, P and Jones, G (2007). Habitat patch size and mating system as determinants of social group size in coral-dwelling fishes. Coral Reefs 26(1): 165-174.
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[136]  Turner, R, Cakacaka, A, Graham, N, Polunin, N, Pratchett, M, Stead, S and Wilson, S (2007). Declining reliance on marine resources in remote South Pacific societies: ecological versus socio-economic drivers. Coral Reefs 26(4): 997-1008.
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[137]  Ulstrup, K, van Oppen, MJH, Kühl, M and Ralph, P (2007). Inter-polyp genetic and physiological characterisation of Symbiodinium in an Acropora valida colony. Marine Biology 153(2): 225-234.
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[138]  Underwood, JN, Smith, LD, van Oppen, MJH and Gilmour, JP (2007). Multiple scales of genetic connectivity in a brooding coral on isolated reefs following catastrophic bleaching. Molecular Ecology 16(4): 771-784.
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[139]  van Oppen, M (2007). Theme section on the “Conservation Genetics of Coral Reefs”. Coral Reefs 26(3): 461-462.
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[140]  van Oppen, MJH (2007). Perspective: Hidden diversity in coral endosymbionts unveiled. Molecular Ecology 16(6): 1125-1126.
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[141]  van Oppen, MJH, Underwood, JN, Muirhead, AN and Peplow, L (2007). Ten microsatellite loci for the reef-building coral Acropora millepora (Cnidaria, Scleractinia) from the Great Barrier Reef, Australia. Molecular Ecology Notes 7(3): 436-438.
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[142]  Vigliola, L, Doherty, PJ, Meekan, MG, Drown, DM, Jones, ME and Barber, PH (2007). Genetic identity determines risk of post-settlement mortality of a marine fish. Ecology 88(5): 1263-1277.
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[143]  Walker, SPW, Ryen, CA and McCormick, MI (2007). Rapid larval growth predisposes sex change and sexual size dimorphism in a protogynous hermaphrodite, Parapercis snyderi Jordan & Starks 1905. Journal of Fish Biology 71(5): 1347-1357.
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[144]  Wilson, KA, Underwood, EC, Morrison, SA, Klausmeyer, KR, Murdoch, WW, Reyers, B, Wardell-Johnson, G, Marquet, PA, Rundel, PW, McBride, MF, Pressey, RL, Bode, M, Hoekstra, JM, Andelman, S, Looker, M, Rondinini, C, Kareiva, P, Shaw, MR and Possingham, HP (2007). Conserving Biodiversity Efficiently: What to Do, Where, and When. PLoS Biology 5(9): e223.
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[145]  Wilson, SG, Stewart, BS, Polovina, JJ, Meekan, MG, Stevens, JD and Galuardi, B (2007). Accuracy and precision of archival tag data: a multiple-tagging study conducted on a whale shark (Rhincodon typus) in the Indian Ocean. Fisheries Oceanography 16(6): 547-554.
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[146]  Wong, MYL, Buston, PM, Munday, PL and Jones, GP (2007). The threat of punishment enforces peaceful cooperation and stabilizes queues in a coral-reef fish. Proceedings of the Royal Society B: Biological Sciences 274(1613): 1093-1099.
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[149]  Yaakub, S, Bellwood, D and van Herwerden, L (2007). A rare hybridization event in two common Caribbean wrasses (genus Halichoeres ; family Labridae). Coral Reefs 26(3): 597-602.
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[150]  Yarden, O, Ainsworth, TD, Roff, G, Leggat, W, Fine, M and Hoegh-Guldberg, O (2007). Increased Prevalence of Ubiquitous Ascomycetes in an Acropoid Coral (Acropora formosa) Exhibiting Symptoms of Brown Band Syndrome and Skeletal Eroding Band Disease. Applied Environmental Microbiology 73(8): 2755-2757.
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Books and Book Chapters [14]

[1]  Diaz-Pulido, G, McCook, LJ, Larkum, AW, Heike K Lotze, Raven, JA, Schaffelke, B, Smith, JE and Steneck, RS (2007). Vulnerability of macroalgae of the Great Barrier Reef to climate change. pp 153-192. In Climate Change and the Great Barrier Reef: A Vulnerability Assessment. J. Johnson and P. Marshall (Eds.). GBRMPA, Townsville.
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[2]  Edgar, G, Russ, G and Babcock, RA (2007). Marine Protected Areas. In Marine Ecology. B. Gillanders and S. Connell (Eds.). Oxford University Press, Oxford, UK.

[3]  Fabricius, KE, Hoegh-Guldberg, O, Johnson, J, McCook, L and Lough, J (2007). Vulnerability of coral reefs of the Great Barrier Reef to climate change. pp 515-554. In Climate Change and the Great Barrier Reef: A Vulnerability Assessment. J. Johnson and P. Marshall (Eds.). GBRMPA, Townsville.
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[4]  Foale, S, MacKenzie, M, Macintyre, M and Browne, B, Direct environmental impacts of mining at Lihir. 2007, M Squared Design. p. 100.
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[5]  Hoegh-Guldberg, O (2007). Impacts of Climate Change on Coral Reefs. pp 59-68. In Impacts of Climate Change on Australian Marine Life. A. J. Hobday, T. A. Okey, E. S. Poloczanska, T. J. Kunz and A. J. Richardson (Eds.). CSIRO Marine and Atmospheric Research
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[6]  Hoegh-Guldberg, O, Anthony, K, Berkelmans, R, Dove, S, Fabricus, K, Lough, J, Marshall, P, van Oppen, MJH, Negri, A and Willis, B (2007). Vulnerability of reef-building corals on the Great Barrier Reef to climate change. pp 271-308. In Climate Change and the Great Barrier Reef: A Vulnerability Assessment. J. Johnson and P. Marshall (Eds.). GBRMPA, Townsville.
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[7]  Kingsford, MJ and Welch, DJ (2007). Vulnerability of pelagic systems of the Great Barrier Reef to climate change. pp 555-592. In Climate Change and the Great Barrier Reef: A Vulnerability Assessment. J. Johnson and P. Marshall (Eds.). GBRMPA, Townsville.
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[8]  Lough, JM (2007). Climate and climate change on the Great Barrier Reef. pp 15-50. In Climate Change and the Great Barrier Reef: A Vulnerability Assessment. J. Johnson and P. Marshall (Eds.). GBRMPA, Townsville.
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[9]  McCook, LJ, Marshall, P, Folke, C, Hughes, TP, Nystrom, M, Obura, D and Salm, R (2007). Ecological resilience, climate change, and the Great Barrier Reef: An introduction. pp 75-96. In Climate Change and the Great Barrier Reef: A Vulnerability Assessment. J. Johnson and P. Marshall (Eds.). GBRMPA, Townsville.
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[10]  McCormick, M (2007). A little stress goes a long way: parental stress and population replenishment. In Marine Ecology. S. Connell and B. Gillanders (Eds.). Oxford University Press, Melbourne

[11]  Munday, PL, Jones, GP, Sheaves, M, Williams, AJ and Goby, G (2007). Vulnerability of fishes of the Great Barrier Reef to climate change. pp 357-392. In Climate Change and the Great Barrier Reef: A Vulnerability Assessment. J. Johnson and P. Marshall (Eds.). GBRMPA, Townsville.
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[12]  Pandolfi, JM (2007). Ecological Succession. pp 1-8. In General EcologyElsevier

[13]  Pandolfi, JM and Greenstein, BJ (2007). Using the past to understand the future: palaeoecology of coral reefs. pp 717-744. In Climate Change and the Great Barrier Reef: A Vulnerability Assessment. J. Johnson and P. Marshall (Eds.). GBRMPA, Townsville.
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[14]  White, A, Gomez, ED, Alcala, AC and Russ, GR (2007). Evolution and Lessons from Fisheries and Coastal Management in the Philippines In Fisheries management: Progress towards sustainability. T. R. McClanahan and J. Castilla (Eds.). Blackwell Publishing, Oxford UK.


Reports [4]

[1]  Foale, S, Social and economic context of marine resource depletion in Gagil and Maap, Yap State, FSM. 2007, Pacific Regional Environment Program: Apia, Samoa. p. 49.

[2]  Hilbert, D, Hughs, L, Johnson, J, Lough, J, Low, T, Pearson, R, Sutherst, R and Whittaker, S, Biodiversity conservation research in a changing climate. 2007, Department of the Environment and Water Resources: Canberra. p. 74.

[3]  McIntyre-Tamwoy, S, Injinoo Community Case Study for the Ecotrust Project. Prepared by Susan McIntyre-Tamwoy with Injinoo Apudhama Lands Trust, Traditional Owner Representatives. 2007, Australian Conservation Foundation.

[4]  McIntyre-Tamwoy, S, Land Proposed for Residential Development at Sandon Point North: A Desktop Assessment of Archaeological Potential. 2007, Stockland Residential.
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Conference Proceedings [2]

[1]  Foale, SJ. (2007). Acknowledging the Importance and potential of governments in managing marine resources in Melanesia. in People and the Sea IV: ‘Who Owns the Coast?: Centre for Maritime Research Conference. CD-ROM publication.

[2]  McCulloch, M. (2007). Coral reefs and global change: the roles of increasing ocean acidity, ocean temperatures, sea-levels and direct human impacts Coral reefs and global change: the roles of increasing ocean acidity, ocean temperatures, sea-levels and direct human impacts. In Goldschmidt 2007 – “atoms to planets”. Cologne, Germany: Cambridge Publications. A645.

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